Magnetic Resonance Imaging
Volume 26, Issue 7 , Pages 1007-1014 , September 2008

Comparison of pattern recognition methods in classifying high-resolution BOLD signals obtained at high magnetic field in monkeys

Received 21 January 2008 ,Accepted 22 February 2008.

References 

  1. Friston KJ, Worsley KJ, Frackowiak RS, Mazziotta JC, Evans AC. Assessing the significance of focal activations using their spatial extent. Hum Brain Mapp. 1994;214(1):7
  2. Haynes JD, Rees G. Decoding mental states from brain activity in humans. Nat Rev. 2006;7(7):523–534
  3. Mitchell TM, Hutchinson R, Just MA, Niculescu RS, Pereira F, Wang X. Classifying instantaneous cognitive states from FMRI data. In: AMIA Annual Symposium proceedings/AMIA Symposium. 2003;p. 465–469
  4. LaConte SM, Peltier SJ, Hu XP. Real-time fMRI using brain-state classification. Hum Brain Mapp. 2007;28(10):1033–1044
  5. Cox DD, Savoy RL. Functional magnetic resonance imaging (fMRI) “brain reading”: detecting and classifying distributed patterns of fMRI activity in human visual cortex. Neuroimage. 2003;19(2 Pt 1):261–270
  6. Aguirre GK, Zarahn E, D'Esposito M. An area within human ventral cortex sensitive to “building” stimuli: evidence and implications. Neuron. 1998;21(2):373–383
  7. Epstein R, Kanwisher N. A cortical representation of the local visual environment. Nature. 1998;392(6676):598–601
  8. Kanwisher N, McDermott J, Chun MM. The fusiform face area: a module in human extrastriate cortex specialized for face perception. J Neurosci. 1997;17(11):4302–4311
  9. Haxby JV, Gobbini MI, Furey ML, Ishai A, Schouten JL, Pietrini P. Distributed and overlapping representations of faces and objects in ventral temporal cortex. Science (New York, NY). 2001;293(5539):2425–2430
  10. Carlson TA, Schrater P, He S. Patterns of activity in the categorical representations of objects. J Cogn Neurosci. 2003;15(5):704–717
  11. Ng AY, Jordan M.I. On discriminative vs. generative classifiers: a comparison of logistic regression and naive Bayes. NIPS; 2001.
  12. Tsao DY, Freiwald WA, Knutsen TA, Mandeville JB, Tootell RB. Faces and objects in macaque cerebral cortex. Nat Neurosci. 2003;6(9):989–995
  13. Gati JS, Menon RS, Ugurbil K, Rutt BK. Experimental determination of the BOLD field strength dependence in vessels and tissue. Magn Reson Med. 1997;38(2):296–302
  14. Ugurbil K, Toth L, Kim DS. How accurate is magnetic resonance imaging of brain function?. Trends Neurosci. 2003;26(2):108–114
  15. Yacoub E, Duong TQ, Van De Moortele PF, et al. Spin-echo fMRI in humans using high spatial resolutions and high magnetic fields. Magn Reson Med. 2003;49(4):655–664
  16. Pfeuffer J, Merkle H, Beyerlein M, Steudel T, Logothetis NK. Anatomical and functional MR imaging in the macaque monkey using a vertical large-bore 7 Tesla setup. Magn Reson Imaging. 2004;22(10):1343–1359
  17. Keliris GA, Shmuel A, Ku SP, et al. Robust controlled functional MRI in alert monkeys at high magnetic field: effects of jaw and body movements. Neuroimage. 2007;36(3):550–570
  18. Goense J, Ku SP, Merkle H, Tolias AS, Logothetis NK. fMRI of the temporal lobe of the awake monkey at 7T. Neuroimage. 2008;
  19. Gruetter R. Automatic, localized in vivo adjustment of all first- and second-order shim coils. Magn Reson Med. 1993;29(6):804–811
  20. Logothetis NK, Guggenberger H, Peled S, Pauls J. Functional imaging of the monkey brain. Nat Neurosci. 1999;2(6):555–562
  21. Frahm J, Haase A, Matthaei D. Rapid three-dimensional MR imaging using the FLASH technique. J Comput Assist Tomogr. 1986;10(2):363–368
  22. Golland P, Fischl B. Permutation tests for classification: towards statistical significance in image-based studies. Inf Process Med Imaging. 2003;18:330–341
  23. Guyon I, Elisseeff A. An introduction to variable and feature selection. J Mach Learn Res. 2003;3:26
  24. Keerthi SS, Lin CJ. Asymptotic behaviors of support vector machines with Gaussian kernel. Neural Comput. 2003;15(7):1667–1689
  25. Song L, Bedo J, Borgwardt KM, Gretton A, Smola A. Gene selection via the BAHSIC family of algorithms. Bioinformatics (Oxford, England). 2007;23(13):490–498
  26. Schoelkopf B, Smola A. In: Learning with kernels (chapter 2). Cambridge (MA): MIT Press; 2002;p. 187–404
  27. Desimone R, Schein SJ, Moran J, Ungerleider LG. Contour, color and shape analysis beyond the striate cortex. Vision Res. 1985;25(3):441–452
  28. Desimone R, Ungerleider LG. Multiple visual areas in the caudal superior temporal sulcus of the macaque. J Comp Neurol. 1986;248(2):164–189
  29. Pereira F, Gordon G. The support vector decomposition machine. Proc of ICML. 2006;Pittsburgh, PA
  30. Haynes JD, Rees G. Predicting the orientation of invisible stimuli from activity in human primary visual cortex. Nat Neurosci. 2005;8(5):686–691

PII: S0730-725X(08)00099-4

doi: 10.1016/j.mri.2008.02.016

Magnetic Resonance Imaging
Volume 26, Issue 7 , Pages 1007-1014 , September 2008