Magnetic Resonance Imaging
Volume 28, Issue 7 , Pages 947-956 , September 2010

Assessment of spatial BOLD sensitivity variations in fMRI using gradient-echo field maps

  • Peter Mannfolk

      Affiliations

    • Department of Medical Radiation Physics, Clinical Sciences Lund, Lund University, Barngatan 2B, SE-22185 Lund, Sweden
    • Corresponding Author InformationCorresponding author. Tel.: +46 46 173146; fax: +46 46 178540.
  • ,
  • Ronnie Wirestam

      Affiliations

    • Department of Medical Radiation Physics, Clinical Sciences Lund, Lund University, Barngatan 2B, SE-22185 Lund, Sweden
  • ,
  • Markus Nilsson

      Affiliations

    • Department of Medical Radiation Physics, Clinical Sciences Lund, Lund University, Barngatan 2B, SE-22185 Lund, Sweden
  • ,
  • Danielle van Westen

      Affiliations

    • Department of Diagnostic Radiology, Clinical Sciences Lund, Lund University, SE-22185 Lund, Sweden
  • ,
  • Freddy Ståhlberg

      Affiliations

    • Department of Medical Radiation Physics, Clinical Sciences Lund, Lund University, Barngatan 2B, SE-22185 Lund, Sweden
    • Department of Diagnostic Radiology, Clinical Sciences Lund, Lund University, SE-22185 Lund, Sweden
  • ,
  • Johan Olsrud

      Affiliations

    • Centre for Medical Imaging and Physiology, Skåne University Hospital, Lund, MR Department, SE-22185 Lund, Sweden

Received 18 July 2009 ,Revised 14 April 2010 ,Accepted 8 May 2010.

References 

  1. Jezzard P, Buxton RB. The clinical potential of functional magnetic resonance imaging. J Magn Reson Imaging. 2006;23(6):787–793
  2. Stippich C. In:  Baert AL,  Brady LW,  Heilmann HP,  Knauth M,  Molls M,  Nider C,  Sartor K editor. Clinical functional MRI, presurgical functional neuroimaging. Berlin: Springer; 2007;
  3. Reichenbach JR, Venkatesan R, Yablonskiy DA, Thompson MR, Lai S, Haacke EM. Theory and application of static field inhomogeneity effects in gradient-echo imaging. J Magn Reson Imaging. 1997;7(2):266–279
  4. Devlin JT, Russell RP, Davis MH, Price CJ, Wilson J, Moss HE, et al. Susceptibility-induced loss of signal: comparing PET and fMRI on a semantic task. Neuroimage. 2000;11(6 Pt 1):589–600
  5. Fransson P, Merboldt KD, Ingvar M, Petersson KM, Frahm J. Functional MRI with reduced susceptibility artifact: high-resolution mapping of episodic memory encoding. NeuroReport. 2001;12(7):1415–1420
  6. Powell HW, Richardson MP, Symms MR, Boulby PA, Thompson PJ, Duncan JS, et al. Preoperative fMRI predicts memory decline following anterior temporal lobe resection. J Neurol Neurosurg Psychiatry. 2008;79(6):686–693
  7. Rabin ML, Narayan VM, Kimberg DY, Casasanto DJ, Glosser G, Tracy JI, et al. Functional MRI predicts post-surgical memory following temporal lobectomy. Brain. 2004;127(Pt 10):2286–2298
  8. Richardson MP, Strange BA, Thompson PJ, Baxendale SA, Duncan JS, Dolan RJ. Pre-operative verbal memory fMRI predicts post-operative memory decline after left temporal lobe resection. Brain. 2004;127(Pt 11):2419–2426
  9. Jezzard P, Balaban RS. Correction for geometric distortion in echo planar images from B0 field variations. Magn Reson Med. 1995;34(1):65–73
  10. Andersson JL, Hutton C, Ashburner J, Turner R, Friston K. Modeling geometric deformations in EPI time series. Neuroimage. 2001;13(5):903–919
  11. Ojemann JG, Akbudak E, Snyder AZ, McKinstry RC, Raichle ME, Conturo TE. Anatomic localization and quantitative analysis of gradient refocused echo-planar fMRI susceptibility artifacts. Neuroimage. 1997;6(3):156–167
  12. Lipschutz B, Friston KJ, Ashburner J, Turner R, Price CJ. Assessing study-specific regional variations in fMRI signal. Neuroimage. 2001;13(2):392–398
  13. Deichmann R, Josephs O, Hutton C, Corfield DR, Turner R. Compensation of susceptibility-induced BOLD sensitivity losses in echo-planar fMRI imaging. Neuroimage. 2002;15(1):120–135
  14. Weiskopf N, Hutton C, Josephs O, Turner R, Deichmann R. Optimized EPI for fMRI studies of the orbitofrontal cortex: compensation of susceptibility-induced gradients in the readout direction. Magma. 2007;20(1):39–49
  15. Deichmann R, Gottfried JA, Hutton C, Turner R. Optimized EPI for fMRI studies of the orbitofrontal cortex. Neuroimage. 2003;19(2 Pt 1):430–441
  16. Weiskopf N, Hutton C, Josephs O, Deichmann R. Optimal EPI parameters for reduction of susceptibility-induced BOLD sensitivity losses: a whole-brain analysis at 3 T and 1.5 T. Neuroimage. 2006;33(2):493–504
  17. Cusack R, Russell B, Cox SM, De Panfilis C, Schwarzbauer C, Ansorge R. An evaluation of the use of passive shimming to improve frontal sensitivity in fMRI. Neuroimage. 2005;24(1):82–91
  18. Balteau E, Hutton C, Weiskopf N. Improved shimming for fMRI specifically optimizing the local BOLD sensitivity. Neuroimage. 2010;49(1):327–336
  19. Olsrud J, Nilsson A, Mannfolk P, Waites A, Stahlberg F. A two-compartment gel phantom for optimization and quality assurance in clinical BOLD fMRI. Magn Reson Imaging. 2008;26(2):279–286
  20. Jenkinson M. Fast, automated, N-dimensional phase-unwrapping algorithm. Magn Reson Med. 2003;49(1):193–197
  21. Maldjian JA, Laurienti PJ, Burdette JH. Precentral gyrus discrepancy in electronic versions of the Talairach atlas. Neuroimage. 2004;21(1):450–455
  22. Maldjian JA, Laurienti PJ, Kraft RA, Burdette JH. An automated method for neuroanatomic and cytoarchitectonic atlas-based interrogation of fMRI data sets. Neuroimage. 2003;19(3):1233–1239
  23. Kiehl KA, Liddle PF, Smith AM, Mendrek A, Forster BB, Hare RD. Neural pathways involved in the processing of concrete and abstract words. Hum Brain Mapp. 1999;7(4):225–233
  24. Seto E, Sela G, McIlroy WE, Black SE, Staines WR, Bronskill MJ, et al. Quantifying head motion associated with motor tasks used in fMRI. Neuroimage. 2001;14(2):284–297
  25. Hill DL, Smith AD, Simmons A, Maurer CR, Cox TC, Elwes R, et al. Sources of error in comparing functional magnetic resonance imaging and invasive electrophysiological recordings. J Neurosurg. 2000;93(2):214–223

 This study was performed with generous support from the Swedish Research Council (grant no. 13514), the Crafoord Foundation and the Knut & Alice Wallenberg Foundation (grant no. 1998-0182).

PII: S0730-725X(10)00134-7

doi: 10.1016/j.mri.2010.05.003

Magnetic Resonance Imaging
Volume 28, Issue 7 , Pages 947-956 , September 2010